Applied Parallel Computing: State of the Art in Scientific Computing. 8th International Workshop, PARA 2006, Umea, Sweden, June 18-21, 2006, Revised Selected PapersBo Kagström, Erik Elmroth, Jack Dongarra, Jerzy Wasniewski Springer, 2007. gada 22. sept. - 1192 lappuses This book constitutes the thoroughly refereed post-proceedings of the 8th International Workshop on Applied Parallel Computing, PARA 2006. It covers partial differential equations, parallel scientific computing algorithms, linear algebra, simulation environments, algorithms and applications for blue gene/L, scientific computing tools and applications, parallel search algorithms, peer-to-peer computing, mobility and security, algorithms for single-chip multiprocessors. |
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Using Noncanonical Array Layouts in Dense Matrix Operations | 580 |
New Data Distribution for Solving Triangular Systems on Distributed Memory Machines | 589 |
The Design of a New OutofCore Multifrontal Solver | 598 |
Cholesky Factorization of Band Matrices Using Multithreaded BLAS | 608 |
A MasterWorker Type Eigensolver for Molecular Orbital Computations | 617 |
Minisymposium Abstract | 626 |
Using Parallel Computing and Grid Systems for Genetic Mapping of Quantitative Traits | 627 |
Partial Approximation of the Master Equation by the FokkerPlanck Equation | 637 |
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A Highly Efficient Ab Initio TightBindingLike Approximate DensityFunctional Quantum Mechanical Method | 100 |
Protein Folding Properties from Molecular Dynamics Simulations | 109 |
Minisymposium Abstract | 116 |
Parallel Variants of the Multishift QZ Algorithm with Advanced Deflation Techniques | 117 |
Parallel Algorithms and Condition Estimators for Standard and Generalized Triangular SylvesterType Matrix Equations | 127 |
LAPACKStyle Codes for Pivoted Choleskyand QR Updating | 137 |
Implementing Linear Algebra Routines on Multicore Processors with Pipelining and a Look Ahead | 147 |
Specialized Spectral Division Algorithms for Generalized Eigenproblems Via the InverseFree Iteration | 157 |
Minisymposium Abstract | 167 |
Some Experiences on the Accuracy and Parallel Performance of OpenFOAM for CFD in Water Turbines | 168 |
Minisymposium Abstract | 177 |
Trusting Floating Point Benchmarks Are Your Benchmarks Really Data Independent? | 178 |
CoMPI Configuration of Collective Operations in LAMMPI Using the Scheme Programming Language | 189 |
A Load Balancing Strategy for Computations on Large ReadOnly Data Sets | 198 |
Automatic and Transparent Optimizations of an Applications MPI Communication | 208 |
Parallel Methods for RealTime Visualization of Snow | 218 |
Support for Collaboration Visualization and Monitoring of Parallel Applications Using Shared Windows | 228 |
Minisymposium Abstract | 239 |
Multilevel muFinite Element Analysis for Human Bone Structures | 240 |
HighLevel User Interfaces for the DOE ACTS Collection | 251 |
HighPerformance Graph Algorithms from Parallel Sparse Matrices | 260 |
A Python Module for PDEBased Numerical Modelling | 270 |
Architecture for a ComponentBased Scientific Computing System | 280 |
Workload Characterization Using the TAU Performance System | 289 |
Minisymposium Abstract | 297 |
Supporting SLA Negotiation for QoSEnabled Simulation Services in a Medical Grid Environment | 298 |
A Transparent Grid Filesystem | 309 |
Grid Data Integration Based on Schema Mapping | 319 |
Minisymposium Abstract | 329 |
Parallelization of a Public Image Restoration Algorithm | 330 |
Visualizing Katrina Merging Computer Simulations with Observations | 340 |
Generation of Microlensing Magnification Patterns with High Performance Computing Techniques | 351 |
Phase Space Modulations in Magnetised Plasmas by a Mildly Relativistic TwoStream Instability | 361 |
Implementing a ParticleFluid Model of Auroral Electrons | 371 |
Minisymposium Abstract | 380 |
Automatic Tuning in Computational Grids | 381 |
Automated Performance Analysis Using ASL Performance Properties | 390 |
A Parallel TraceData Interface for Scalable Performance Analysis | 398 |
Search of Performance Inefficiencies in Message Passing Applications with KappaPI 2 Tool | 409 |
Automatic Monitoring of Memory Hierarchies in Threaded Applications with AMEBA | 420 |
Visualization of Repetitive Patterns in Event Traces | 430 |
Optimization of Instrumentation in Parallel Performance Evaluation Tools | 440 |
GASP A Standardized Performance Analysis Tool Interface for Global Address Space Programming Models | 450 |
Integrated Runtime Measurement Summarisation and Selective Event Tracing for Scalable Parallel Execution Performance Diagnosis | 460 |
Minisymposium Abstract | 470 |
Roadmap for the ARC Grid Middleware | 471 |
Data Management for the Worlds Largest Machine | 480 |
Metacomputations on the CLUSTERIX Grid | 489 |
Minisymposium Abstract | 501 |
A Benchmarking Study | 502 |
Mechanical Properties of Random Alloys from Quantum Mechanical Simulations | 510 |
Minisymposium Abstract | 520 |
Cache Oblivious Matrix Operations Using Peano Curves | 521 |
Recursive Blocked Algorithms for Solving Periodic Triangular SylvesterType Matrix Equations | 531 |
Minimal Data Copy for Dense Linear Algebra Factorization | 540 |
Three Algorithms for Cholesky Factorization on Distributed Memory Using Packed Storage | 550 |
InPlace Transposition of Rectangular Matrices | 560 |
Rectangular Full Packed Format for LAPACK Algorithms Timings on Several Computers | 570 |
Design Construction and Use of the FISH Server | 647 |
Minisymposium Abstract | 658 |
Interactive Volume Visualization of Fluid Flow Simulation Data | 659 |
Minisymposium Abstract | 665 |
The Iterative Solver Template Library | 666 |
A Parallel CFD Code for the Simulation of Euler and NavierStokes Problems on Unstructured Grids | 676 |
Making Hybrid Tsunami Simulators in a Parallel Software Framework | 686 |
A Problem Solving Environment for Developing Parallel FEM Applications | 694 |
SyFi An Element Matrix Factory | 703 |
Overview of a Unified C++ Implementation of the Finite and Spectral Element Methods in 1D 2D and 3D | 712 |
Parallel Program Complex for 3D Unsteady Flow Simulation | 722 |
Minisymposium Abstract | 732 |
Simulation of Multiphysics Problems Using Adaptive Finite Elements | 733 |
A New Domain Decomposition Approach Suited for Grid Computing | 744 |
Parallelization of the Mesh Refinement Algorithm of the FDEM Program Package | 754 |
Load Balancing for the Numerical Solution of the NavierStokes Equations | 764 |
A Method of Adaptive Coarsening for Compressing Scientific Datasets | 774 |
A Computational Framework for Topological Operations | 781 |
Applications of Grid Computing in Genetics and Proteomics | 791 |
Grid Enabling Your Data Resources with OGSADAI | 799 |
Enabling Streaming for the New Generation of Grids | 809 |
Dynamic Clusters Available Under Clusterix Grid | 819 |
AgentBased Societies for the Sharing Brokerage and Allocation of Grid Resources | 830 |
OpusIB Grid Enabled Opteron Cluster with InfiniBand Interconnect | 840 |
Extending the HPCICTM Geographical Categorization Model for Grid Computing | 850 |
An EasytoUse Interface for MPIBased Parallel Matrix Computation Libraries | 860 |
A Study of Real World IO Performance in Parallel Scientific Computing | 871 |
Epitaxial Surface Growth with Local Interaction Parallel and Nonparallel Simulations | 882 |
Data Dependence Analysis for the Parallelization of Numerical Tree Codes | 890 |
Efficient Assembly of Sparse Matrices Using Hashing | 900 |
A WebSiteBased Partitioning Technique for Reducing Preprocessing Overhead of Parallel PageRank Computation | 908 |
Is CacheOblivious DGEMM Viable? | 919 |
Partitioning and Blocking Issues for a Parallel Incomplete Factorization | 929 |
Automatic Performance Tuning for the Multisection with Multiple Eigenvalues Method for Symmetric Tridiagonal Eigenproblems | 938 |
Optimizing a Parallel Selfverified Method for Solving Linear Systems | 949 |
A Parallel Block Iterative Method for Interactive Contacting Rigid Multibody Simulations on Multicore PCs | 956 |
HighPerformanceDistributedMemory Solvers for Python | 966 |
A Set of General Interfaces to Sparse Direct Solver Libraries | 976 |
dSpline Based Incremental ParameterEstimation in Automatic Performance Tuning | 986 |
A High Performance Generic Scientific Simulation Environment | 996 |
NestStepModelica Mathematical Modeling and BulkSynchronous Parallel Simulation | 1006 |
Flecs a Flexible Coupling Shell Application to FluidStructure Interaction | 1016 |
New Scalability Frontiers in Ab Initio Electronic Structure Calculations Using the BGL Supercomputer | 1026 |
A PAPI Implementation for BlueGene | 1036 |
Numerical Simulation of 3D Acoustic Logging | 1045 |
An Improved Interval Global Optimization Method and Its Application to Price Management Problem | 1055 |
Optimizing Neural Network Classifiers with ROOT on a Rocks Linux Cluster | 1065 |
A Model of SmallScale Turbulence for Use in the PPM Gas Dynamics Scheme | 1074 |
Mapping in Heterogeneous Systems with Heuristic Methods | 1084 |
Scalable Fine Grained Development for Large Coarse Grained Platforms | 1094 |
Performance Analysis of Two Parallel GameTree Search Applications | 1105 |
Implementation of a BlackBox Global Optimization Algorithm with a Parallel Branch and Bound Template | 1115 |
Parallelization Techniques for Tabu Search | 1126 |
A Selfreconfigurable Topology for Unstructured P2P Systems | 1136 |
A Middleware for Job Distribution in PeertoPeer Networks | 1147 |
Mobile Agents Selfoptimization with MAWeS | 1158 |
Performance Impact of Resource Conflicts on Chip Multiprocessor Servers | 1168 |
An Implementation of Parallel 1D FFT Using SSE3 Instructions on DualCore Processors | 1178 |
Author Index | 1189 |
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Applied Parallel Computing: State of the Art in Scientific Computing. 8th ... Bo Kagström,Erik Elmroth,Jack Dongarra,Jerzy Wasniewski Priekšskatījums nav pieejams - 2007 |
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